STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20219.1Regulatory protein MarR; InterPro IPR000835; KEGG: dfe:Dfer_2423 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family. (149 aa)    
Predicted Functional Partners:
ADR21642.1
KEGG: fjo:Fjoh_1859 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF983).
  
     0.645
ADR20220.1
DoxX family protein; InterPro IPR011637; KEGG: lic:LIC10613 hypothetical protein; PFAM: DoxX family protein; SPTR: Putative uncharacterized protein.
       0.639
ADR21125.1
Regulatory protein MarR; InterPro IPR000835; KEGG: zpr:ZPR_0838 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: MarR family transcriptional regulator; PFAM: MarR family.
  
     0.639
ADR20221.1
KEGG: dfe:Dfer_3650 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold.
       0.628
ADR20218.1
Hypothetical protein.
       0.566
ADR23280.1
COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: sli:Slin_0326 Mg-chelatase subunit ChlI-like protein; SPTR: Magnesium chelatase, subunit ChlI family protein; PFAM: Sigma-54 interaction domain.
  
     0.524
ADR23162.1
TonB-dependent receptor plug; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910; KEGG: sli:Slin_1227 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; SPTR: Putative outer membrane protein probably involved in nutrient binding; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.508
ADR20229.1
LmbE family protein; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737: IPR000276; KEGG: nve:NEMVE_v1g224788 hypothetical protein; PFAM: LmbE family protein; SPTR: GlcNAc-PI de-N-acetylase family protein; PFAM: GlcNAc-PI de-N-acetylase.
 
     0.491
ADR22861.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: fjo:Fjoh_1438 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor plug; SPTR: Putative outer membrane protein probably involved in nutrient binding; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.476
ADR20222.1
LVIVD repeat-containing protein; COGs: COG5276 conserved hypothetical protein; InterPro IPR013211; KEGG: sli:Slin_5493 hypothetical protein; PFAM: LVIVD repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: LVIVD repeat.
       0.465
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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