STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20221.1KEGG: dfe:Dfer_3650 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold. (333 aa)    
Predicted Functional Partners:
ADR20220.1
DoxX family protein; InterPro IPR011637; KEGG: lic:LIC10613 hypothetical protein; PFAM: DoxX family protein; SPTR: Putative uncharacterized protein.
       0.762
ADR23256.1
COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: zpr:ZPR_0250 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family.
  
 0.678
ADR20222.1
LVIVD repeat-containing protein; COGs: COG5276 conserved hypothetical protein; InterPro IPR013211; KEGG: sli:Slin_5493 hypothetical protein; PFAM: LVIVD repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: LVIVD repeat.
 
     0.671
ADR20219.1
Regulatory protein MarR; InterPro IPR000835; KEGG: dfe:Dfer_2423 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.
       0.628
ADR20223.1
KEGG: fsu:Fisuc_3104 hypothetical protein; SPTR: Predicted protein.
       0.563
ADR20218.1
Hypothetical protein.
       0.468
ADR22306.1
Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: rrs:RoseRS_4381 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain.
  
     0.417
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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