STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20223.1KEGG: fsu:Fisuc_3104 hypothetical protein; SPTR: Predicted protein. (199 aa)    
Predicted Functional Partners:
ADR20222.1
LVIVD repeat-containing protein; COGs: COG5276 conserved hypothetical protein; InterPro IPR013211; KEGG: sli:Slin_5493 hypothetical protein; PFAM: LVIVD repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: LVIVD repeat.
       0.773
ADR20221.1
KEGG: dfe:Dfer_3650 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold.
       0.563
ADR20220.1
DoxX family protein; InterPro IPR011637; KEGG: lic:LIC10613 hypothetical protein; PFAM: DoxX family protein; SPTR: Putative uncharacterized protein.
       0.555
ADR20219.1
Regulatory protein MarR; InterPro IPR000835; KEGG: dfe:Dfer_2423 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family.
       0.465
ADR20224.1
Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: chu:CHU_1788 permease; PFAM: permease YjgP/YjgQ family protein; SPTR: Putative permease, YjgP/YjgQ family; PFAM: Predicted permease YjgP/YjgQ family.
       0.434
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.