STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20259.1Conserved repeat domain protein; InterPro IPR006530: IPR001434; KEGG: cpi:Cpin_4789 YD repeat protein; PFAM: YD repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved repeat domain protein; YD repeat protein; TIGRFAM: YD repeat (two copies); conserved repeat domain. (3501 aa)    
Predicted Functional Partners:
ADR20253.1
Outer membrane chaperone Skp (OmpH); InterPro IPR020135: IPR005632; KEGG: chu:CHU_3211 hypothetical protein; PFAM: outer membrane chaperone Skp (OmpH); SPTR: Putative uncharacterized protein; PFAM: Outer membrane protein (OmpH-like).
 
     0.877
ADR20260.1
KEGG: sul:SYO3AOP1_0270 nucleoside-triphosphate--adenylate kinase; SPTR: Adenylate kinase.
       0.773
ADR20255.1
KEGG: fjo:Fjoh_0601 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.747
ADR20545.1
YD repeat protein; InterPro IPR006530; KEGG: phe:Phep_1097 YD repeat protein; PFAM: YD repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: YD repeat protein; PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies).
 
     0.744
ADR20257.1
KEGG: chu:CHU_1524 hypothetical protein; SPTR: Lipoprotein, putative.
       0.733
ADR20254.1
KEGG: tva:TVAG_331250 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.732
ADR20256.1
Hypothetical protein; KEGG: bpo:BP951000_2245 DNA-directed RNA polymerase omega subunit family protein-like protein; SPTR: Putative uncharacterized protein.
       0.732
ADR20258.1
Hypothetical protein; KEGG: pyo:PY07067 ring-infected erythrocyte surface antigen; SPTR: Ring-infected erythrocyte surface antigen.
       0.732
ADR22970.1
KEGG: cpi:Cpin_2772 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.682
ADR20542.1
Hypothetical protein; InterPro IPR020003; KEGG: cpi:Cpin_1395 YD repeat protein; SPTR: Cell well associated RhsD protein; TIGRFAM: RHS repeat-associated core domain.
  
     0.662
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.