STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20292.1PAS sensor protein; InterPro IPR013655: IPR001610: IPR000014: IPR000700; KEGG: cpi:Cpin_0325 GAF sensor hybrid histidine kinase; PFAM: PAS fold-3 domain protein; SMART: PAC repeat-containing protein; SPTR: PAS domain S-box protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box. (616 aa)    
Predicted Functional Partners:
ADR23344.1
COGs: COG5002 Signal transduction histidine kinase; InterPro IPR005467: IPR004358: IPR003661: IPR003594; KEGG: sli:Slin_5610 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Alkaline phosphatase synthesis sensor protein PhoR; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
 
 0.817
ADR20832.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 008207: IPR001610: IPR003661: IPR003594: IPR013767: IPR004358; KEGG: chu:CHU_2784 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Multi-sensor hybrid histid [...]
 
 0.795
ADR23701.1
CheB methylesterase; COGs: COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; InterPro IPR000673; KEGG: dae:Dtox_3784 CheB methylesterase; PFAM: CheB methylesterase; PRIAM: Protein-glutamate methylesterase; SPTR: CheB methylesterase; PFAM: CheB methylesterase.
 
  
 0.731
ADR23700.1
MCP methyltransferase, CheR-type; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterPro IPR000780: IPR002052; KEGG: cpi:Cpin_2258 MCP methyltransferase, CheR-type; PFAM: MCP methyltransferase CheR-type; PRIAM: Protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; SPTR: CheR methyltransferase, SAM binding domain; PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain.
    0.730
ADR20048.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000780: IPR000673: IPR013767: IPR003661: IPR 003594: IPR000014: IPR001610: IPR005467: IPR000700: IPR002052; KEGG: cts:Ctha_1653 signal transduction histidine kinase with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; PAS domain containing protein; PAC repeat-containing pr [...]
 
  
 0.609
ADR20291.1
KEGG: osa:4339641 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.524
ADR22558.1
KEGG: dde:Dde_3046 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.520
ADR23705.1
KEGG: azl:AZL_c04650 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.512
ADR23609.1
Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterProIPR019734: IPR013026: IPR001932: IPR001440: IPR 010822; KEGG: lbl:LBL_2179 signal transduction protein; PFAM: Stage II sporulation protein E; Tetratricopeptide TPR_1 repeat-containing protein; SMART: protein phosphatase 2C domain protein; Tetratricopeptide repeat; SPTR: Serine/threonine protein kinases; PFAM: Stage II sporulation protein E (SpoIIE); Tetratricopeptide repeat.
  
 0.473
ADR20406.1
PAS/PAC sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014: IPR004358: IPR013655: IPR013767: IPR 003661: IPR003594: IPR001789: IPR001610: IPR005467: IPR000700; KEGG: zpr:ZPR_2293 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat- [...]
 
 0.466
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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