STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20308.1KEGG: bth:BT_3234 hypothetical protein; SPTR: Putative uncharacterized protein. (395 aa)    
Predicted Functional Partners:
ADR20309.1
Hypothetical protein.
       0.447
ADR20307.1
Transcriptional regulator, PadR family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: cpi:Cpin_2396 transcriptional regulator, PadR-like family; PFAM: transcriptional regulator PadR family protein; SPTR: Conserved protein; PFAM: Transcriptional regulator PadR-like family.
  
    0.419
ADR20305.1
Hypothetical protein; KEGG: pha:PSHAa0523 Na+/H+ antiporter; SPTR: NADH dehydrogenase subunit 2.
       0.407
ADR20306.1
Hypothetical protein; InterPro IPR001307; KEGG: cpi:Cpin_2395 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.407
ADR20304.1
Peptidase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: fps:FP1243 peptidase; SPTR: Probable peptidase; PFAM: Prolyl oligopeptidase family.
       0.403
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.