STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20333.1Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR001440: IPR019734: IPR006597: IPR013026; KEGG: chu:CHU_1538 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat. (1022 aa)    
Predicted Functional Partners:
ADR20334.1
KEGG: sli:Slin_2039 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.951
ADR23296.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterProIPR011659: IPR006665: IPR006664: IPR013026: IPR 019734; KEGG: sli:Slin_5203 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: OmpA/MotB domain protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
  
 0.879
ADR20337.1
Outer membrane transport energization protein ExbD; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: aas:Aasi_0054 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; PFAM: Biopolymer transport protein ExbD/TolR; TC 2.C.1.1.1.
 
  
 0.837
ADR22903.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterProIPR019734: IPR013026: IPR006665: IPR011659: IPR 006664: IPR018521; KEGG: chu:CHU_2715 peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SMART: Tetratricopeptide repeat; SPTR: Peptidoglycan-associated lipoprotein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
  
 0.835
ADR20338.1
KEGG: sli:Slin_1995 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.826
ADR20336.1
COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: zpr:ZPR_3934 MotA/TolQ/ExbB family biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Putative biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family; TC 2.C.1.1.1.
 
  
 0.810
ADR23131.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659: IPR006665: IPR013026; KEGG: chu:CHU_1558 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: Outer membrane protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
  
 0.805
ADR20808.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR011659: IPR006664; KEGG: chu:CHU_2993 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: Possible outer membrane protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
  
 0.772
ADR20969.1
KEGG: aas:Aasi_1197 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: OstA-like protein.
 
  
 0.770
ADR21014.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR011659: IPR006664; KEGG: chu:CHU_2008 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: OmpA family protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
  
 0.734
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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