STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20379.1COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); KEGG: cat:CA2559_10158 short-chain dehydrogenase; SPTR: Short-chain dehydrogenase; PFAM: short chain dehydrogenase. (518 aa)    
Predicted Functional Partners:
ADR20377.1
Protein of unknown function DUF227; InterPro IPR004119: IPR015897; KEGG: dre:797003 hypothetical LOC797003; PFAM: protein of unknown function DUF227; SMART: CHK kinase-like; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF227).
  
 
 0.611
ADR23246.1
InterPro IPR001623; KEGG: gfo:GFO_1973 DnaJ-like protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: DnaJ-like protein; PFAM: DnaJ domain.
 
   0.608
ADR20378.1
Inositol monophosphatase; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760: IPR020583; KEGG: caa:Caka_0241 inositol monophosphatase; PFAM: inositol monophosphatase; SPTR: Inositol monophosphatase family; PFAM: Inositol monophosphatase family.
     
 0.553
ADR20380.1
RNase HI; InterPro IPR002156; KEGG: pca:Pcar_2273 RNase HI; SPTR: RNase HI; PFAM: RNase H.
  
 
 0.517
ADR23220.1
COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR014043: IPR004410; KEGG: fps:FP0408 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.
  
 
 0.498
ADR22394.1
HTTM domain protein; InterPro IPR011020; KEGG: gfo:GFO_2513 vitamin K-dependent gamma-carboxylase; SMART: HTTM domain protein; SPTR: Gamma-glutamyl carboxylase-like protein; PFAM: Vitamin K-dependent gamma-carboxylase.
  
  
 0.487
ADR20561.1
KEGG: cat:CA2559_09178 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.476
ADR21167.1
3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.474
ADR22873.1
Arsenate reductase-like protein; InterPro IPR006660; KEGG: cat:CA2559_10508 hypothetical protein; PFAM: arsenate reductase and related; SPTR: Putative uncharacterized protein; PFAM: ArsC family; Belongs to the ArsC family.
  
   
 0.450
ADR21277.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR000531; KEGG: cat:CA2559_04165 outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
    0.428
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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