STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20429.1KEGG: msu:MS0110 hypothetical protein; SPTR: Putative uncharacterized protein. (283 aa)    
Predicted Functional Partners:
ADR20428.1
Hypothetical protein; KEGG: gga:424958 replication factor C (activator 1) 4, 37kDa; SPTR: Putative uncharacterized protein.
       0.689
ADR20430.1
COGs: COG2356 Endonuclease I; InterPro IPR007346; KEGG: oih:OB2858 extracellular ribonuclease; PFAM: Endonuclease I; SPTR: Extracellular ribonuclease; PFAM: Endonuclease I.
       0.628
ADR20427.1
KEGG: plm:Plim_1075 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.480
ADR20431.1
Hypothetical protein; KEGG: apa:APP7_0703 Xaa-Pro aminopeptidase; SPTR: Xaa-Pro aminopeptidase.
       0.400
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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