STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20451.1Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: cpi:Cpin_3628 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, LytTR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain. (237 aa)    
Predicted Functional Partners:
ADR20452.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: bth:BT_1458 putative two-component system sensor histidine kinase; PFAM: histidine kinase internal region; SPTR: Signaling protein without kinase domain; PFAM: Histidine kinase.
 
   0.959
ADR21097.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: phe:Phep_0216 histidine kinase internal region; PFAM: histidine kinase internal region; SPTR: Putative transmembrane protein; PFAM: Histidine kinase.
 
   0.829
ADR21334.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559: IPR003594; KEGG: phe:Phep_1541 histidine kinase internal region; PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SPTR: Signal transduction ATPase, FimS family protein; PFAM: Histidine kinase.
   0.829
ADR22332.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: gfo:GFO_2163 two-component system sensor histidine kinase; PFAM: histidine kinase internal region; SPTR: Putative two component system, sensor protein; PFAM: Histidine kinase.
 
   0.829
ADR21285.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: dfe:Dfer_5141 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; SPTR: Putative transmembrane sensor histidine kinase transcription regulator protein; PFAM: Histidine kinase.
 
   0.828
ADR22147.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: dfe:Dfer_5311 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; SPTR: Signal transduction histidine kinase, LytS; PFAM: Histidine kinase.
 
   0.827
ADR22527.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: cpi:Cpin_0375 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; SPTR: Putative transmembrane sensor histidine kinase transcription regulator protein; PFAM: Histidine kinase.
 
   0.827
ADR23638.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: fps:FP1651 two-component system sensor; PFAM: histidine kinase internal region; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase.
 
   0.827
ADR20453.1
Hypothetical protein.
       0.567
ADR20454.1
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rcu:RCOM_0330130 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: Hydrolase, alpha/beta hydrolase fold family, putative; PFAM: Putative esterase.
       0.508
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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