STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20456.1Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: kko:Kkor_2081 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase family enzyme; PFAM: Amidohydrolase family. (476 aa)    
Predicted Functional Partners:
ADR20455.1
KEGG: chu:CHU_2401 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.727
ADR21504.1
COGs: COG2986 Histidine ammonia-lyase; InterPro IPR001106: IPR005921; KEGG: fjo:Fjoh_2576 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; PRIAM: Histidine ammonia-lyase; SPTR: Histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase.
  
  
 0.563
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.521
ADR23361.1
KEGG: msv:Mesil_3075 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.521
ADR20457.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rmr:Rmar_1357 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase.
  
    0.494
ADR20458.1
KEGG: gfo:GFO_0867 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.490
ADR20459.1
KEGG: tra:Trad_2511 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.490
ADR20460.1
KEGG: pph:Ppha_1909 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.490
ADR23585.1
KEGG: cpc:Cpar_1949 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.457
ADR20461.1
COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: sli:Slin_5746 response regulator receiver protein; PFAM: LytTr DNA-binding region; SPTR: Response regulator receiver protein; PFAM: LytTr DNA-binding domain.
 
     0.439
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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