STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20458.1KEGG: gfo:GFO_0867 hypothetical protein; SPTR: Putative uncharacterized protein. (388 aa)    
Predicted Functional Partners:
ADR20457.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rmr:Rmar_1357 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase.
       0.773
ADR20459.1
KEGG: tra:Trad_2511 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR20460.1
KEGG: pph:Ppha_1909 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR20461.1
COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: sli:Slin_5746 response regulator receiver protein; PFAM: LytTr DNA-binding region; SPTR: Response regulator receiver protein; PFAM: LytTr DNA-binding domain.
       0.508
ADR20456.1
Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: kko:Kkor_2081 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase family enzyme; PFAM: Amidohydrolase family.
       0.490
ADR20455.1
KEGG: chu:CHU_2401 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.464
ADR22874.1
KEGG: sru:SRU_2860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.451
ADR22875.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: dfe:Dfer_1098 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.443
ADR21879.1
Peptidase M14 carboxypeptidase A; InterPro IPR000834; KEGG: rbi:RB2501_11282 secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; PFAM: peptidase M14 carboxypeptidase A; SPTR: Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain; PFAM: Zinc carboxypeptidase.
  
     0.409
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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