STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20477.1Alpha amylase catalytic region; InterPro IPR006046: IPR006047: IPR015237: IPR006589; KEGG: fjo:Fjoh_1948 cytoplasmic alpha-amylase; PFAM: alpha amylase catalytic region; Domain of unknown function DUF1939; SMART: alpha amylase catalytic sub domain; SPTR: Candidate alpha amylase; Glycoside hydrolase family 13; PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF1939); Belongs to the glycosyl hydrolase 13 family. (467 aa)    
Predicted Functional Partners:
ADR20150.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: hor:Hore_22530 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Oligo-1,6-glucosidase; PFAM: Alpha amylase, catalytic domain.
 
 
 0.937
ADR22217.1
Glycoside hydrolase 97; InterPro IPR019563; KEGG: gfo:GFO_3444 alpha-glucosidase; PFAM: Glycoside hydrolase 97; SPTR: Alpha-glucosidase; PFAM: Glycoside hydrolase 97.
 
 
  0.924
ADR23381.1
Glycoside hydrolase family 13 domain protein; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589: IPR004193: IPR006047: IPR006048; KEGG: chu:CHU_1345 glycogen branching protein; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; SPTR: Candidate glycogen branching enzyme, glycoside hydrolase family 13 protein; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain.
  
  
  0.917
ADR20739.1
COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: hor:Hore_19090 alpha-glucosidase; PFAM: glycoside hydrolase family 31; SPTR: A-glucosidase, glycoside hydrolase family 31 protein; PFAM: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
    
 0.909
ADR23545.1
COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: chu:CHU_0803 A-glucosidase; PFAM: glycoside hydrolase family 31; PRIAM: Alpha-glucosidase; SPTR: A-glucosidase, glycoside hydrolase family 31 protein; PFAM: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
    
 0.909
ADR22036.1
COGs: COG0297 Glycogen synthase; InterPro IPR013534; KEGG: sli:Slin_4463 starch synthase; PFAM: Starch synthase catalytic domain-containing protein; SPTR: Glycogen synthase; PFAM: Starch synthase catalytic domain.
 
  
 0.743
ADR22498.1
COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337: IPR006379: IPR001830; KEGG: cpi:Cpin_4022 trehalose-phosphatase; PFAM: glycosyl transferase family 20; trehalose-phosphatase; SPTR: Trehalose-6-phosphate synthase-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB.
  
 
 0.573
ADR22418.1
COGs: COG3408 Glycogen debranching protein; KEGG: sli:Slin_6094 glycogen debranching protein-like protein; SPTR: Glycogen debranching protein-like protein; PFAM: Protein of unknown function, DUF608.
  
  
 0.545
ADR20478.1
Response regulator receiver; InterPro IPR001789; KEGG: zmn:Za10_1485 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two-component system response regulator; PFAM: Response regulator receiver domain.
 
     0.534
ADR20253.1
Outer membrane chaperone Skp (OmpH); InterPro IPR020135: IPR005632; KEGG: chu:CHU_3211 hypothetical protein; PFAM: outer membrane chaperone Skp (OmpH); SPTR: Putative uncharacterized protein; PFAM: Outer membrane protein (OmpH-like).
  
     0.527
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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