STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20482.1InterPro IPR000866: IPR017936; KEGG: tth:TT_P0168 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: AhpC/TSA family. (194 aa)    
Predicted Functional Partners:
ADR20480.1
KEGG: sli:Slin_1651 hypothetical protein; SPTR: Lipoprotein, putative.
 
     0.803
ADR23558.1
KEGG: chu:CHU_2695 hypothetical protein; SPTR: Membrane protein, putative.
  
     0.675
ADR22392.1
KEGG: chu:CHU_0064 hypothetical protein; SPTR: Membrane protein, putative.
  
     0.648
ADR21916.1
KEGG: aas:Aasi_0797 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.633
ADR23124.1
PKD domain containing protein; InterPro IPR013517: IPR000601; KEGG: phe:Phep_2593 conserved repeat domain protein; PFAM: PKD domain containing protein; FG-GAP repeat protein; SMART: PKD domain containing protein; SPTR: Conserved repeat domain protein; PFAM: PKD domain.
  
     0.558
ADR20814.1
KEGG: chu:CHU_3341 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.538
ADR22619.1
Hypothetical protein; KEGG: chu:CHU_3774 histidine kinase; SPTR: Putative uncharacterized protein.
  
     0.533
ADR21261.1
KEGG: app:CAP2UW1_2790 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.530
ADR23676.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0063 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1.
  
    0.526
ADR21260.1
KEGG: slt:Slit_0937 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.522
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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