STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20489.1KEGG: chu:CHU_2333 hypothetical protein; SPTR: Putative uncharacterized protein. (162 aa)    
Predicted Functional Partners:
ADR20490.1
KEGG: chu:CHU_1606 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain.
       0.776
ADR20491.1
COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: fjo:Fjoh_1432 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase.
       0.741
ADR20492.1
COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: sli:Slin_1583 ROK family protein; PFAM: ROK family protein; SPTR: ROK; PFAM: ROK family.
       0.627
ADR20707.1
InterPro IPR013857; KEGG: gfo:GFO_2305 hypothetical protein; PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; SPTR: UOS1; PFAM: Complex I intermediate-associated protein 30 (CIA30).
    
 
 0.555
ADR22442.1
Membrane protein; COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: chu:CHU_3675 membrane protein; SPTR: Membrane protein, putative; PFAM: MMPL family.
  
     0.495
ADR20493.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR011545: IPR001650: IPR014001: IPR014021: IPR 014014: IPR000629; KEGG: cat:CA2559_09353 ATP-dependent RNA helicase, DEAD/DEAH box family protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent RNA helicase, DEAD/DEAH box family protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
       0.446
ADR20494.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR011545: IPR001650: IPR014001: IPR014021: IPR 014014: IPR000629; KEGG: chu:CHU_1658 DEAD box-related helicase (ATP-dependent RNA helicase); PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DEAD box-related helicase (ATP-dependent RNA helicase); PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
       0.426
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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