STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20520.1Amine oxidase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937; KEGG: mxa:MXAN_6060 amine oxidase, flavin-containing; PFAM: amine oxidase; SPTR: Oxidoreductase, FAD-binding protein; PFAM: Flavin containing amine oxidoreductase. (422 aa)    
Predicted Functional Partners:
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
  
 0.792
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
  
 0.741
ADR20521.1
Hypothetical protein; KEGG: dan:Dana_GF11555 GF11555 gene product from transcript GF11555-RA; SPTR: GF11555.
       0.661
ADR22363.1
COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: aas:Aasi_1314 hypothetical protein; PFAM: phosphoribosyltransferase; SPTR: Competence protein; manually curated; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein.
  
    0.601
ADR20637.1
KEGG: caa:Caka_0930 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.559
ADR21243.1
SOUL heme-binding protein; InterPro IPR006917; KEGG: cpb:Cphamn1_2389 SOUL heme-binding protein; PFAM: SOUL heme-binding protein; SPTR: Putative uncharacterized protein; PFAM: SOUL heme-binding protein.
  
     0.542
ADR20522.1
COGs: COG4864 conserved hypothetical protein; KEGG: aas:Aasi_1337 hypothetical protein; SPTR: UPF0365 protein Aasi_1337; PFAM: SigmaW regulon antibacterial.
       0.470
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
   
 0.410
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.