STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20523.1Hypothetical protein; InterPro IPR001611; KEGG: ctc:CTC00494 internalin A-like protein/putative S-layer protein; SPTR: Internalin A-like protein/putative S-layer protein; PFAM: Leucine Rich Repeat. (819 aa)    
Predicted Functional Partners:
ADR20524.1
KEGG: sli:Slin_6465 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.789
ADR20525.1
KEGG: dfe:Dfer_3581 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.786
ADR20526.1
KEGG: ddi:DDB_G0285815 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.704
ADR23039.1
KEGG: cpi:Cpin_6912 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.679
ADR22944.1
KEGG: dfe:Dfer_4063 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.619
ADR21369.1
KEGG: cpi:Cpin_5460 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.608
ADR21148.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG4995 conserved hypothetical protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: chu:CHU_1214 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat domain protein.
  
     0.572
ADR20806.1
KEGG: chu:CHU_2804 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.561
ADR21729.1
WD40-like beta Propeller containing protein; InterPro IPR011659; KEGG: chu:CHU_3233 WD-40-like repeat-containing protein; PFAM: WD40-like beta Propeller containing protein; SPTR: Putative uncharacterized protein; PFAM: WD40-like Beta Propeller Repeat.
  
     0.553
ADR23128.1
PKD domain containing protein; InterPro IPR000601: IPR007110; KEGG: dfe:Dfer_3689 PKD domain containing protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Putative uncharacterized protein; PFAM: PKD domain.
  
     0.548
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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