STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20546.1KEGG: mcp:MCAP_0862 hypothetical protein; SPTR: Membrane protein, putative. (429 aa)    
Predicted Functional Partners:
ADR20545.1
YD repeat protein; InterPro IPR006530; KEGG: phe:Phep_1097 YD repeat protein; PFAM: YD repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: YD repeat protein; PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies).
       0.773
ADR20544.1
Hypothetical protein; InterPro IPR002328; KEGG: cpi:Cpin_1395 YD repeat protein; SPTR: Cell well associated RhsD protein; TIGRFAM: RHS repeat-associated core domain.
       0.648
ADR20543.1
Hypothetical protein; KEGG: fjo:Fjoh_4292 integral membrane sensor signal transduction histidine kinase; SPTR: Putative uncharacterized protein.
       0.635
ADR20541.1
COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: chu:CHU_1410 hypothetical protein; SPTR: MORN variant repeat protein; PFAM: MORN repeat variant.
       0.412
ADR20542.1
Hypothetical protein; InterPro IPR020003; KEGG: cpi:Cpin_1395 YD repeat protein; SPTR: Cell well associated RhsD protein; TIGRFAM: RHS repeat-associated core domain.
       0.412
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.