STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20585.1Sulfotransferase; InterPro IPR000863; KEGG: hch:HCH_03434 hypothetical protein; PFAM: sulfotransferase; SPTR: Putative uncharacterized protein; PFAM: Sulfotransferase domain. (296 aa)    
Predicted Functional Partners:
ADR20584.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: amr:AM1_4833 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
   
   0.790
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
 
  
 0.585
ADR20416.1
Outer membrane adhesin like proteiin; InterProIPR010221: IPR002126: IPR001304: IPR000601: IPR 007110: IPR018120; KEGG: mmw:Mmwyl1_1672 beta strand repeat-containing protein; PFAM: Cadherin; C-type lectin domain protein; SMART: Cadherin; PKD domain containing protein; SPTR: Autotransporter-associated beta strand repeat protein; TIGRFAM: outer membrane adhesin like proteiin; PFAM: Cadherin domain.
  
 
  0.546
ADR20586.1
KEGG: rxy:Rxyl_2678 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: O-methyltransferase.
  
   0.520
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.492
ADR20712.1
Hypothetical protein; InterPro IPR002110: IPR020683; KEGG: tva:TVAG_291510 ankyrin repeat protein; SPTR: Ankyrin repeat protein, putative; PFAM: Ankyrin repeat.
  
  0.486
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.479
ADR21864.1
PKD domain containing protein; InterPro IPR000601: IPR006626; KEGG: dfe:Dfer_4525 parallel beta-helix repeat protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; Parallel beta-helix repeat; SPTR: Parallel beta-helix repeat protein; PFAM: PKD domain; REJ domain.
 
     0.453
ADR22177.1
WD40 repeat, subgroup; COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR019781: IPR001680: IPR 019775; KEGG: chu:CHU_1024 hypothetical protein; PFAM: WD40 repeat, subgroup; SPTR: Peptidase C14, caspase catalytic subunit p20, putative; PFAM: WD domain, G-beta repeat.
  
 0.453
ADR20582.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: gwc:GWCH70_3258 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Capsular polysaccharide biosynthesis glycosyltransferase capM; PFAM: Glycosyl transferases group 1.
   
   0.441
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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