STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20626.1Peptidase M10A and M12B matrixin and adamalysin; InterPro IPR001818; KEGG: rbi:RB2501_15574 predicted extracellular metal-dependent peptidase; PFAM: peptidase M10A and M12B matrixin and adamalysin; SPTR: Putative uncharacterized protein. (814 aa)    
Predicted Functional Partners:
ADR21879.1
Peptidase M14 carboxypeptidase A; InterPro IPR000834; KEGG: rbi:RB2501_11282 secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; PFAM: peptidase M14 carboxypeptidase A; SPTR: Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain; PFAM: Zinc carboxypeptidase.
  
     0.761
ADR22931.1
Peptidase M14 carboxypeptidase A; InterPro IPR000834; KEGG: gfo:GFO_2233 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; SPTR: Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain, putative; PFAM: Zinc carboxypeptidase.
  
     0.713
ADR22216.1
Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: rbi:RB2501_11652 amidohydrolase family enzyme; PFAM: amidohydrolase; SPTR: Amidohydrolase family enzyme; PFAM: Amidohydrolase family.
  
     0.685
ADR22918.1
Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR003961: IPR007484; KEGG: gfo:GFO_1039 fibronectin type III repeat-containing secreted peptidase, family M28; PFAM: peptidase M28; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; SPTR: Probable aminopeptidase fused to fibronectin type 3 domain; PFAM: Peptidase family M28; Fibronectin type III domain.
  
     0.584
ADR23200.1
KEGG: sli:Slin_0262 Xaa-Pro aminopeptidase family enzyme; SPTR: Xaa-Pro aminopeptidase family enzyme; PFAM: Metallopeptidase family M24.
  
     0.575
ADR20627.1
KEGG: cpc:Cpar_1255 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.550
ADR21263.1
Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: gfo:GFO_0275 amidohydrolase family protein; PFAM: amidohydrolase; SPTR: Xaa-Pro dipeptidase family enzyme; PFAM: Amidohydrolase family.
  
     0.524
ADR20623.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: sli:Slin_2236 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
       0.507
ADR20621.1
Asparaginase; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR020827: IPR006034: IPR006033; KEGG: dfe:Dfer_5475 L-asparaginase, type I; PFAM: Asparaginase/glutaminase; PRIAM: 1-alkyl-2-acetylglycerophosphocholine esterase; SPTR: L-asparaginase I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I.
       0.505
ADR20622.1
Hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR012278: IPR001130: IPR015991; KEGG: vvu:VV1_0903 putative Mg-dependent DNase; PFAM: TatD-related deoxyribonuclease; SPTR: Deoxyribonuclease, TatD family; TIGRFAM: hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family.
       0.505
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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