STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20631.1COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: sli:Slin_2238 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2. (374 aa)    
Predicted Functional Partners:
ADR20632.1
KEGG: dfe:Dfer_2025 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Uncharacterised protein family (UPF0104).
 
     0.868
ADR20630.1
KEGG: chu:CHU_2181 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.805
ADR20628.1
Protein of unknown function UPF0060; COGs: COG1742 conserved hypothetical protein; InterPro IPR003844; KEGG: npu:Npun_R3289 hypothetical protein; PFAM: protein of unknown function UPF0060; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised BCR, YnfA/UPF0060 family.
       0.762
ADR20629.1
KEGG: chu:CHU_0726 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3703).
       0.762
ADR22028.1
Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).
  
     0.590
ADR20624.1
COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: cat:CA2559_01375 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: GlcNAc deacetylase-related protein, carbohydrate esterase family 4 protein; PFAM: Polysaccharide deacetylase.
 
  
 0.554
ADR22598.1
KEGG: chu:CHU_0507 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.554
ADR20633.1
KEGG: cat:CA2559_12793 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: BlaR1 peptidase M56.
       0.457
ADR21362.1
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734: IPR013026: IPR001440; KEGG: ter:Tery_3996 tetratricopeptide TPR_2; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2; PFAM: Tetratricopeptide repeat.
  
 
 0.446
ADR22653.1
InterPro IPR019734: IPR013026: IPR001440; KEGG: chu:CHU_0003 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat containing protein; PFAM: Tetratricopeptide repeat.
 
 
 0.446
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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