STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20652.1COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: aba:Acid345_2396 transglutaminase-like; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Transglutaminase-like superfamily. (456 aa)    
Predicted Functional Partners:
ADR20650.1
KEGG: lbf:LBF_2165 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
vapC
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.773
ADR20649.1
PAS sensor protein; InterPro IPR000700: IPR003660: IPR003018: IPR000014; KEGG: npu:Npun_R2375 multi-sensor hybrid histidine kinase; PFAM: histidine kinase HAMP region domain protein; SMART: GAF domain protein; histidine kinase HAMP region domain protein; SPTR: Two-component hybrid sensor and regulator, putative; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; PAS fold; TIGRFAM: PAS domain S-box.
       0.582
ADR20303.1
Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sli:Slin_3469 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain.
  
     0.542
ADR20647.1
Fatty acid hydroxylase; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: lic:LIC12336 sterol desaturase-related protein; PFAM: fatty acid hydroxylase; SPTR: Sterol desaturase-related protein; PFAM: Fatty acid hydroxylase superfamily.
       0.482
ADR20648.1
KEGG: sli:Slin_5550 hypothetical protein; SPTR: Lipoprotein, putative.
       0.482
ADR23136.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: bfr:BF3686 putative transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative transcriptional regulator; PFAM: Helix-turn-helix.
  
     0.446
ADR20510.1
InterPro IPR000462; KEGG: fps:FP1646 CDP-alcohol phosphatidyltransferase class-I family protein; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-alcohol phosphatidyltransferase class-I family protein; PFAM: CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.422
ADR21272.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG4135 ABC-type uncharacterized transport system permease component; InterPro IPR000515; KEGG: cby:CLM_1266 ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, permease protein, putative; PFAM: Binding-protein-dependent transport system inner membrane component.
  
     0.409
ADR21273.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II; InterPro IPR000515; KEGG: amt:Amet_3293 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative ABC-transporter membrane protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
     0.409
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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