STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20685.1KEGG: sli:Slin_1983 hypothetical protein; SPTR: Putative uncharacterized protein. (129 aa)    
Predicted Functional Partners:
ADR23411.1
KEGG: chu:CHU_1568 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.643
ADR20072.1
Protein of unknown function DUF490; InterPro IPR007452; KEGG: dfe:Dfer_3011 hypothetical protein; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF490).
  
     0.629
ADR23171.1
Protein of unknown function DUF177; COGs: COG1399 metal-binding possibly nucleic acid-binding protein; InterPro IPR003772; KEGG: dfe:Dfer_4154 protein of unknown function DUF177; PFAM: protein of unknown function DUF177; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1399.
  
     0.625
ADR20939.1
KEGG: dfe:Dfer_2924 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.595
ADR23303.1
KEGG: dfe:Dfer_3773 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.595
ADR23684.1
KEGG: dfe:Dfer_0221 DoxX family protein; SPTR: Putative uncharacterized protein.
  
     0.593
ADR22532.1
COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: chu:CHU_0169 uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: Possible uroporphyrinogen-III synthase; manually curated; PFAM: Uroporphyrinogen-III synthase HemD.
  
     0.552
ADR22119.1
KEGG: zpr:ZPR_2758 S-adenosyl-L-methionine-dependent methyltransferase; SPTR: Putative uncharacterized protein.
  
     0.543
ADR23551.1
KEGG: sli:Slin_2018 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.541
ADR20684.1
KEGG: chu:CHU_0324 DnaJ-like chaperone; heat shock protein; SPTR: Putative uncharacterized protein.
       0.539
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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