STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20693.1Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127: IPR006128: IPR006129; KEGG: chu:CHU_2025 Mn/Zn ABC transporter, substrate-binding protein; PFAM: periplasmic solute binding protein; SPTR: Mn/Zn ABC transporter, substrate-binding protein; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family. (314 aa)    
Predicted Functional Partners:
ADR20695.1
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001367: IPR001626; KEGG: chu:CHU_2027 Mn2+/Zn2+ ABC transporter, permease; PFAM: ABC-3 protein; iron dependent repressor; SMART: iron dependent repressor; SPTR: Mn2+/Zn2+ ABC transporter, permease; PFAM: ABC 3 transport family; Iron dependent repressor, metal binding and dimerisation domain.
 
 0.999
ADR20694.1
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR017871: IPR003439: IPR003593; KEGG: chu:CHU_2026 Mn/Zn ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Mn/Zn ABC transporter, ATP-binding protein; PFAM: ABC transporter.
 
 
 0.998
ADR20697.1
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: chu:CHU_2028 Mn2+/Zn2+ ABC transporter, permease; PFAM: ABC-3 protein; SPTR: Mn2+/Zn2+ ABC transporter, permease; PFAM: ABC 3 transport family.
 
 0.998
ADR20692.1
Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367: IPR007167; KEGG: chu:CHU_2024 Mn-dependent transcriptional regulator; PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; SPTR: Putative transcriptional regulator; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
 
  
 0.865
rpsN
SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.614
rpmB
COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: fjo:Fjoh_4983 50S ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.607
ADR20696.1
Azurin; COGs: COG3241 Azurin; InterPro IPR000923: IPR014068; KEGG: dfe:Dfer_2909 azurin; PFAM: blue (type 1) copper domain protein; SPTR: Azurin; TIGRFAM: azurin; PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: azurin.
       0.558
ADR20691.1
InterPro IPR001296; KEGG: chu:CHU_2023 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.500
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
     
 0.424
ADR20698.1
Thioredoxin-related protein-like protein; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR017937: IPR017936; KEGG: sli:Slin_4487 thioredoxin-related protein-like protein; SPTR: Thioredoxin-related protein-like protein; PFAM: Protein of unknown function, DUF255.
       0.420
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.