STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20723.1Alanine racemase domain protein; COGs: COG3616 amino acid aldolase or racemase; InterPro IPR001608; KEGG: tet:TTHERM_00688570 Alanine racemase, N-terminal domain containing protein; PFAM: alanine racemase domain protein; SPTR: Putative uncharacterized protein; PFAM: Alanine racemase, N-terminal domain. (365 aa)    
Predicted Functional Partners:
ADR20721.1
KEGG: gfo:GFO_0335 secreted protein; SPTR: Putative uncharacterized protein; PFAM: Lipid A 3-O-deacylase (PagL).
       0.773
ADR20722.1
KEGG: gfo:GFO_0336 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2807).
       0.773
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
       0.752
ADR20718.1
COGs: COG0183 Acetyl-CoA acetyltransferase; InterProIPR020610: IPR020613: IPR002155: IPR020616: IPR 020617; KEGG: cpi:Cpin_1205 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; PRIAM: 3-oxoadipyl-CoA thiolase; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.574
ADR20719.1
Hypothetical protein; KEGG: svo:SVI_1446 flagellar biosynthesis protein FlhA; SPTR: Flagellar biosynthesis protein FlhA.
       0.574
ADR20188.1
KEGG: coc:Coch_2082 hypothetical protein; SPTR: Putative uncharacterized protein.
   
    0.482
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.