STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20728.1KEGG: gfo:GFO_0860 hypothetical protein; SPTR: Putative uncharacterized protein. (84 aa)    
Predicted Functional Partners:
ADR20729.1
PilT protein domain protein; InterPro IPR002716; KEGG: gfo:GFO_0859 hypothetical protein; PFAM: PilT protein domain protein; SPTR: Putative uncharacterized protein; PFAM: PIN domain.
 
     0.950
ADR21183.1
KEGG: tde:TDE0236 PilT domain-containing protein; SPTR: PIN domain protein.
 
     0.778
ADR20726.1
Thioesterase superfamily protein; COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: cse:Cseg_1199 acyl-ACP thioesterase; PFAM: thioesterase superfamily protein; SPTR: Putative uncharacterized protein; PFAM: Acyl-ACP thioesterase.
       0.500
ADR20727.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006589: IPR006047: IPR006046; KEGG: sli:Slin_0347 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: AmyM; PFAM: Alpha amylase, catalytic domain.
       0.500
ADR21741.1
KEGG: zpr:ZPR_0704 transcriptional regulator/antitoxin, MazE; SPTR: Transcriptional regulator/antitoxin, MazE.
  
     0.497
ADR22286.1
Protein of unknown function DUF490; InterPro IPR007452; KEGG: zpr:ZPR_2082 hypothetical protein; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF490).
  
     0.411
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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