STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20741.1Major facilitator superfamily MFS_1; COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: cat:CA2559_05075 putative sugar transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Hypothetical transport protein; PFAM: Major Facilitator Superfamily. (446 aa)    
Predicted Functional Partners:
ADR20740.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006589: IPR006047; KEGG: zpr:ZPR_2815 alpha amylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase; PFAM: Alpha amylase, catalytic domain.
 
  
 0.915
ADR20739.1
COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: hor:Hore_19090 alpha-glucosidase; PFAM: glycoside hydrolase family 31; SPTR: A-glucosidase, glycoside hydrolase family 31 protein; PFAM: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
  
  
 0.805
ADR20734.1
Alpha amylase catalytic region; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589: IPR004193: IPR006047; KEGG: sli:Slin_0361 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; SPTR: Alpha-amylase; PFAM: Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family.
 
     0.629
ADR22217.1
Glycoside hydrolase 97; InterPro IPR019563; KEGG: gfo:GFO_3444 alpha-glucosidase; PFAM: Glycoside hydrolase 97; SPTR: Alpha-glucosidase; PFAM: Glycoside hydrolase 97.
 
     0.589
ADR20742.1
Proprotein convertase P; InterPro IPR001590: IPR003961: IPR002884; KEGG: hau:Haur_0966 hypothetical protein; PFAM: Proprotein convertase P; Fibronectin type III domain protein; SPTR: Putative uncharacterized protein; PFAM: Developmentally Regulated MAPK Interacting Protein; Proprotein convertase P-domain.
 
     0.522
ADR20732.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: srm:SRM_00437 conserved hypothetical protein, outer membrane, containing RagB/SusD domain; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
    0.455
ADR22879.1
HAD-superfamily hydrolase, subfamily IA, variant 3; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005834: IPR006402: IPR006439: IPR005833; KEGG: sli:Slin_0811 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; [...]
  
  
 0.406
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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