STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20756.1Transferase hexapeptide repeat containing protein; COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: fjo:Fjoh_1678 carbonic anhydrase; PFAM: transferase hexapeptide repeat containing protein; SPTR: Acetyltransferase/carbonic anhydrase. (170 aa)    
Predicted Functional Partners:
GafA
GafA; COGs: COG1956 GAF domain-containing protein; KEGG: phe:Phep_2040 GafA; GAF domain-containing protein; SPTR: GAF domain-containing protein involved in signal transduction.
      0.688
ADR21412.1
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.682
ADR20757.1
YceI family protein; InterPro IPR007372; KEGG: cpi:Cpin_1135 YceI family protein; PFAM: YceI family protein; SPTR: YCE I like family protein; PFAM: YceI-like domain; Belongs to the UPF0312 family.
       0.542
fabH
3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
       0.480
ADR20758.1
Chorismate binding protein; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR015890: IPR019999; KEGG: sli:Slin_3444 para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; SPTR: p-aminobenzoate synthetase, component I; PFAM: chorismate binding enzyme.
       0.400
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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