STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20761.1KEGG: sli:Slin_0989 hypothetical protein; SPTR: Putative uncharacterized protein. (175 aa)    
Predicted Functional Partners:
ADR20763.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.893
ADR20762.1
KEGG: sli:Slin_0988 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.850
ADR20760.1
COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR003593: IPR002197: IPR020441; KEGG: chu:CHU_1822 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain.
       0.812
miaB
tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
  
    0.785
ADR22487.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: sli:Slin_5634 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein.
  
     0.764
ADR22111.1
KEGG: chu:CHU_0307 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723).
  
     0.746
ADR23171.1
Protein of unknown function DUF177; COGs: COG1399 metal-binding possibly nucleic acid-binding protein; InterPro IPR003772; KEGG: dfe:Dfer_4154 protein of unknown function DUF177; PFAM: protein of unknown function DUF177; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1399.
  
     0.738
ADR20133.1
KEGG: dfe:Dfer_2899 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3109).
  
     0.734
ADR20969.1
KEGG: aas:Aasi_1197 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: OstA-like protein.
  
     0.728
ADR21548.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827: IPR000184; KEGG: chu:CHU_1917 outer membrane protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Surface antigen variable number repeat; Surface antigen.
  
     0.728
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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