STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20845.1FAD dependent oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076: IPR000172; KEGG: phe:Phep_3645 glucose-methanol-choline oxidoreductase; PFAM: FAD dependent oxidoreductase; glucose-methanol-choline oxidoreductase; SPTR: Glucose-methanol-choline oxidoreductase; PFAM: GMC oxidoreductase. (562 aa)    
Predicted Functional Partners:
ADR20846.1
KEGG: sli:Slin_5805 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
 0.961
ADR20847.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: rmr:Rmar_1734 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
 
  
 0.856
ADR20844.1
KEGG: aeh:Mlg_1165 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2721).
       0.773
ADR20921.1
Protein of unknown function DUF1080; InterPro IPR010496; KEGG: zpr:ZPR_4658 hypothetical protein; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080).
 
     0.720
ADR20922.1
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307: IPR006311; KEGG: sli:Slin_1892 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel.
 
     0.683
ADR20920.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: zpr:ZPR_4657 putative dehydrogenase; PFAM: oxidoreductase domain protein; SPTR: Putative dehydrogenase; manually curated; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.591
ADR20534.1
InterPro IPR013097; KEGG: gfo:GFO_3068 hypothetical protein; PFAM: Stress responsive alpha-beta barrel domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Stress responsive A/B Barrel Domain.
  
     0.582
ADR20842.1
Hypothetical protein; KEGG: ant:Arnit_0896 plasmid stabilization system; SPTR: Putative uncharacterized protein; PFAM: Plasmid stabilisation system protein.
       0.563
ADR20843.1
KEGG: phe:Phep_1819 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.563
ADR22177.1
WD40 repeat, subgroup; COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR019781: IPR001680: IPR 019775; KEGG: chu:CHU_1024 hypothetical protein; PFAM: WD40 repeat, subgroup; SPTR: Peptidase C14, caspase catalytic subunit p20, putative; PFAM: WD domain, G-beta repeat.
    
 0.545
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.