STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20872.1KEGG: chu:CHU_1023 hypothetical protein; SPTR: Putative uncharacterized protein. (454 aa)    
Predicted Functional Partners:
ADR20873.1
Hypothetical protein; InterPro IPR019775: IPR019782: IPR017986: IPR001680; KEGG: chu:CHU_1024 hypothetical protein; SPTR: Peptidase C14, caspase catalytic subunit p20, putative; PFAM: WD domain, G-beta repeat.
       0.781
ADR20874.1
KEGG: chu:CHU_1025 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.781
ADR20870.1
KEGG: chu:CHU_1022 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR20871.1
Cyclic nucleotide-binding protein; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR000595: IPR011110: IPR010822; KEGG: lic:LIC12324 serine/threonine kinase protein; PFAM: Stage II sporulation protein E; Two component regulator propeller; SPTR: Serine/threonine protein kinases, putative; PFAM: Two component regulator propeller; Stage II sporulation protein E (SpoIIE).
       0.773
ADR20875.1
KEGG: pfd:PFDG_02858 hypothetical protein; SPTR: tRNA modification GTPase mnmE.
       0.773
ADR20869.1
Domain of unknown function DUF1987; InterPro IPR018530; KEGG: lic:LIC12326 hypothetical protein; PFAM: Domain of unknown function DUF1987; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1987).
       0.518
ADR20876.1
Conserved repeat domain protein; InterPro IPR000601: IPR001434; KEGG: chu:CHU_1906 CHU large protein, SAP or adhesin AidA-related; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: CHU large protein, possible SAP or adhesin AidA-related; TIGRFAM: conserved repeat domain protein.
       0.504
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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