STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20883.1InterPro IPR011701; KEGG: cpi:Cpin_0923 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily. (385 aa)    
Predicted Functional Partners:
ADR20884.1
KEGG: sli:Slin_6388 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PspC domain.
       0.634
ADR20847.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: rmr:Rmar_1734 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
  
    0.464
ADR20148.1
Alpha,alpha-trehalase; COGs: COG1626 Neutral trehalase; InterPro IPR001661: IPR018232; KEGG: cja:CJA_0284 trehalase, putative, tre37A; PFAM: glycoside hydrolase family 37; PRIAM: Alpha,alpha-trehalase; SPTR: Cytoplasmic trehalase; PFAM: Trehalase.
  
     0.442
ADR20885.1
Outer membrane lipoprotein P61; InterPro IPR019734: IPR013026; KEGG: chu:CHU_2679 outer membrane lipoprotein P61; SPTR: Probable outer membrane lipoprotein P61.
       0.437
ADR23592.1
InterPro IPR000326; KEGG: dfe:Dfer_0022 phosphoesterase PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: Phosphoesterase, PA-phosphatase related protein; PFAM: PAP2 superfamily.
  
     0.405
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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