STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20889.1KEGG: gfo:GFO_1857 hypothetical protein; SPTR: Putative uncharacterized protein. (353 aa)    
Predicted Functional Partners:
ADR20888.1
KEGG: dfe:Dfer_3545 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.900
ADR20887.1
RNA polymerase, sigma-24 subunit, ECF subfamily; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR000838: IPR007627: IPR013249: IPR014284; KEGG: dfe:Dfer_3544 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; manually curated; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
  
 
 0.832
ADR22516.1
KEGG: bfs:BF1965 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.598
ADR20722.1
KEGG: gfo:GFO_0336 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2807).
  
     0.595
ADR22490.1
InterPro IPR007922; KEGG: dfe:Dfer_2709 protein of unknown function DUF721; PFAM: protein of unknown function DUF721; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF721).
  
     0.471
ADR22152.1
PKD domain containing protein; InterPro IPR000601; KEGG: sli:Slin_5463 hypothetical protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Cell surface protein, putative; PFAM: PKD domain.
  
     0.454
ADR22981.1
KEGG: bth:BT_0761 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3352).
  
     0.449
ADR20415.1
Putative membrane protein; InterPro IPR019861; KEGG: chu:CHU_3655 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.444
ADR22172.1
KEGG: dfe:Dfer_4669 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.442
ADR21781.1
KEGG: zpr:ZPR_1704 molecular chaperone DnaK; SPTR: Molecular chaperone DnaK.
  
     0.439
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.