STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20902.1GSCFA domain protein; InterPro IPR018247: IPR014982; KEGG: fjo:Fjoh_1897 hypothetical protein; PFAM: GSCFA domain protein; SPTR: Lipoprotein, putative; PFAM: GSCFA family. (329 aa)    
Predicted Functional Partners:
ADR20903.1
COGs: COG1331 Highly conserved protein containing a thioredoxin domain; KEGG: chu:CHU_2595 hypothetical protein; SPTR: Thymidylate kinase; PFAM: Glycosyl Hydrolase Family 88; Protein of unknown function, DUF255.
   
 
 0.835
priA
Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
  
    0.788
ADR21548.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827: IPR000184; KEGG: chu:CHU_1917 outer membrane protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Surface antigen variable number repeat; Surface antigen.
  
     0.603
ADR20234.1
InterPro IPR007139; KEGG: sli:Slin_2892 protein of unknown function DUF349; PFAM: protein of unknown function DUF349; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF349).
  
     0.571
ADR23272.1
KEGG: chu:CHU_2718 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.552
ADR21893.1
Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: zpr:ZPR_2059 ABC-type transporter periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: Periplasmic-binding protein of ABC transporter; PFAM: Periplasmic binding protein.
  
     0.528
pfkA
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
       0.523
ADR23363.1
KEGG: fjo:Fjoh_0092 hypothetical protein; SPTR: Putative surface layer protein.
  
     0.458
ADR22532.1
COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: chu:CHU_0169 uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: Possible uroporphyrinogen-III synthase; manually curated; PFAM: Uroporphyrinogen-III synthase HemD.
 
     0.449
ADR22459.1
Geranylgeranylglycerol-phosphate geranylgeranyltransferase; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537; KEGG: sli:Slin_3485 UbiA prenyltransferase; PFAM: UbiA prenyltransferase; PRIAM: Geranylgeranylglycerol-phosphate geranylgeranyltransferase; SPTR: Prenyltransferase 2; PFAM: UbiA prenyltransferase family.
 
     0.436
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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