STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20913.1COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: aas:Aasi_0997 hypothetical protein; PFAM: Fe-S metabolism associated SufE; SPTR: Putative uncharacterized protein; PFAM: Fe-S metabolism associated domain. (147 aa)    
Predicted Functional Partners:
ADR20912.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.967
ADR20914.1
FeS assembly SUF system protein; COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744: IPR014291; KEGG: sli:Slin_0162 FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; SPTR: Putative uncharacterized protein; TIGRFAM: FeS assembly SUF system protein; PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein.
     0.944
ADR20908.1
Iron-regulated ABC transporter membrane component SufB; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825: IPR010231; KEGG: chu:CHU_0978 cysteine desulfurase activator complex subunit SufB; PFAM: SufBD protein; SPTR: Putative uncharacterized protein; TIGRFAM: FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
 
 
 0.766
ADR20910.1
Iron-regulated ABC transporter ATPase subunit SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003439: IPR003593: IPR010230; KEGG: chu:CHU_0977 iron-regulated ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ATP-dependent transporter Ycf16; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC.
 
 
 0.748
ADR22417.1
Aminotransferase class V; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: cat:CA2559_02090 hypothetical protein; PFAM: aminotransferase class V; SPTR: Aminotransferase, class V; PFAM: Aminotransferase class-V.
  
 
 0.741
ADR20911.1
FeS assembly protein SufD; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825: IPR011542; KEGG: sli:Slin_0174 FeS assembly protein SufD; PFAM: SufBD protein; SPTR: FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1.
 
 
 0.722
ADR20915.1
InterPro IPR009474; KEGG: dfe:Dfer_5785 protein of unknown function DUF1094; PFAM: protein of unknown function DUF1094; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1094); Belongs to the UPF0403 family.
       0.541
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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