STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20939.1KEGG: dfe:Dfer_2924 hypothetical protein; SPTR: Putative uncharacterized protein. (640 aa)    
Predicted Functional Partners:
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
     0.818
ADR20938.1
PASTA domain containing protein; COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: dfe:Dfer_2925 PASTA domain containing protein; PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein; SPTR: PASTA domain containing protein; PFAM: PASTA domain.
       0.802
ADR23222.1
KEGG: sli:Slin_0230 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
ADR22580.1
KEGG: chu:CHU_3275 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.732
ADR20480.1
KEGG: sli:Slin_1651 hypothetical protein; SPTR: Lipoprotein, putative.
  
     0.726
ADR21729.1
WD40-like beta Propeller containing protein; InterPro IPR011659; KEGG: chu:CHU_3233 WD-40-like repeat-containing protein; PFAM: WD40-like beta Propeller containing protein; SPTR: Putative uncharacterized protein; PFAM: WD40-like Beta Propeller Repeat.
  
     0.726
ADR21574.1
FG-GAP repeat protein; InterPro IPR013517: IPR000834; KEGG: sli:Slin_4333 FG-GAP repeat protein; PFAM: FG-GAP repeat protein; SPTR: FG-GAP repeat protein.
  
     0.713
ADR23411.1
KEGG: chu:CHU_1568 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.708
ADR23129.1
Putative membrane protein; InterPro IPR019861; KEGG: dfe:Dfer_3688 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.701
ADR22496.1
KEGG: sli:Slin_4892 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.694
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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