STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20957.1KEGG: dfe:Dfer_1053 hypothetical protein; SPTR: Putative uncharacterized protein. (78 aa)    
Predicted Functional Partners:
ADR20794.1
KEGG: sli:Slin_5875 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.752
ADR20039.1
KEGG: dfe:Dfer_0460 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.705
ADR23069.1
KEGG: chu:CHU_2520 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.672
ADR20294.1
KEGG: sli:Slin_5597 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.668
ADR20105.1
WD-40 repeat-containing protein; COGs: COG2319 FOG: WD40 repeat; InterProIPR020472: IPR019781: IPR001680: IPR019782: IPR 017986: IPR019775; KEGG: chu:CHU_0759 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: WD-40 repeat-protein; PFAM: WD domain, G-beta repeat.
  
     0.633
ADR22496.1
KEGG: sli:Slin_4892 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.601
ADR22949.1
COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: sli:Slin_5703 putative transcriptional regulator; PFAM: AAA-4 family protein; SPTR: Putative transcriptional regulator; PFAM: Divergent AAA domain.
  
     0.582
ADR20956.1
Major facilitator superfamily MFS_1; InterPro IPR000792: IPR011701; KEGG: rbi:RB2501_12804 permease of the major facilitator superfamily protein; PFAM: major facilitator superfamily MFS_1; SPTR: Permease of the major facilitator superfamily protein; PFAM: Major Facilitator Superfamily.
       0.562
ADR21570.1
KEGG: chu:CHU_1311 hypothetical protein; SPTR: Histone H1-like protein.
  
     0.552
ADR22163.1
KEGG: dfe:Dfer_3626 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.520
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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