STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20960.1COGs: COG1858 Cytochrome c peroxidase; InterPro IPR009056: IPR004852; KEGG: dfe:Dfer_5340 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: Methylamine utilization protein MauG; manually curated; PFAM: Di-haem cytochrome c peroxidase. (311 aa)    
Predicted Functional Partners:
ADR20959.1
KEGG: sli:Slin_3490 hypothetical protein; SPTR: Lipoprotein, putative.
 
     0.933
ADR22729.1
InterPro IPR006626; KEGG: sli:Slin_3272 parallel beta-helix repeat protein; SPTR: Parallel beta-helix repeat protein; TIGRFAM: parallel beta-helix repeat-containing protein; parallel beta-helix repeat (two copies).
 
  
 0.807
ADR23363.1
KEGG: fjo:Fjoh_0092 hypothetical protein; SPTR: Putative surface layer protein.
 
 
 0.737
ADR23618.1
COGs: COG3258 Cytochrome c; InterPro IPR009056; KEGG: azo:azo2669 cytochrome c family protein; SPTR: Putative uncharacterized protein; PFAM: Cytochrome c.
 
  
 0.718
ADR21852.1
KEGG: bvu:BVU_1028 hypothetical protein; SPTR: Putative lipoprotein.
  
 
 0.689
ADR22113.1
KEGG: bfr:BF0046 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.689
ADR20958.1
Hypothetical protein; InterPro IPR018247; KEGG: srm:SRM_02658 hypothetical protein; SPTR: Beta-Ig-H3/fasciclin.
       0.678
ADR22050.1
Protein of unknown function DUF344; COGs: COG2326 conserved hypothetical protein; InterPro IPR016898: IPR005660; KEGG: cpi:Cpin_0387 protein of unknown function DUF344; PFAM: protein of unknown function DUF344; SPTR: Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family.
  
    0.547
ADR22903.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterProIPR019734: IPR013026: IPR006665: IPR011659: IPR 006664: IPR018521; KEGG: chu:CHU_2715 peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SMART: Tetratricopeptide repeat; SPTR: Peptidoglycan-associated lipoprotein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
 
 0.519
ADR20808.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR011659: IPR006664; KEGG: chu:CHU_2993 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: Possible outer membrane protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
 
 0.508
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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