STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20973.1KEGG: chu:CHU_3014 hypothetical protein; SPTR: Putative uncharacterized protein. (299 aa)    
Predicted Functional Partners:
ADR21724.1
KEGG: chu:CHU_3238 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
ADR23311.1
KEGG: dfe:Dfer_4465 gliding motility-related protein; SPTR: SprA.
  
     0.772
ADR22540.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR003107: IPR013026: IPR001440; KEGG: chu:CHU_0177 TPR repeat-containing gliding mobility protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Gliding motility-related protein; TPR repeat-containing protein.
 
     0.770
ADR22870.1
KEGG: chu:CHU_2217 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
ADR22951.1
KEGG: chu:CHU_2709 PorT-related protein; SPTR: PorT-related protein.
  
     0.753
ADR21761.1
Outer membrane chaperone Skp (OmpH); InterPro IPR005632; KEGG: chu:CHU_3413 OmpH family outer membrane protein; PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein, ompH family; PFAM: Outer membrane protein (OmpH-like).
  
     0.747
ADR21008.1
KEGG: sli:Slin_6385 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.724
ADR20367.1
Putative membrane protein; InterPro IPR019861; KEGG: fjo:Fjoh_3477 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.712
ADR20415.1
Putative membrane protein; InterPro IPR019861; KEGG: chu:CHU_3655 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.700
ADR22025.1
Hypothetical protein; COGs: COG2971 N-acetylglucosamine kinase; KEGG: dfe:Dfer_3564 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: BadF/BadG/BcrA/BcrD ATPase family.
  
     0.699
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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