STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20981.1InterPro IPR002035; KEGG: rrs:RoseRS_1396 von Willebrand factor, type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor, type A; PFAM: von Willebrand factor type A domain. (461 aa)    
Predicted Functional Partners:
ADR20982.1
Transketolase central region; COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475: IPR005476; KEGG: phe:Phep_0873 transketolase central region; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: Transketolase, C-terminal subunit; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.
       0.771
ADR21577.1
KEGG: chu:CHU_0208 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.736
ADR23578.1
KEGG: aas:Aasi_0765 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.687
ADR23280.1
COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: sli:Slin_0326 Mg-chelatase subunit ChlI-like protein; SPTR: Magnesium chelatase, subunit ChlI family protein; PFAM: Sigma-54 interaction domain.
  
 
 0.685
ADR21765.1
KEGG: chu:CHU_3409 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.684
ADR22370.1
Hypothetical protein; InterPro IPR017941; KEGG: fps:FP2365 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
     0.652
ADR20980.1
Transketolase domain-containing protein; COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: phe:Phep_0874 transketolase domain protein; PFAM: Transketolase domain-containing protein; SPTR: Transketolase subunit A; PFAM: Transketolase, thiamine diphosphate binding domain.
     
 0.644
ADR20977.1
Fumarylacetoacetate (FAA) hydrolase; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: sli:Slin_0979 fumarylacetoacetate (FAA) hydrolase; PFAM: fumarylacetoacetate (FAA) hydrolase; SPTR: Fumarylacetoacetate (FAA) hydrolase; PFAM: Fumarylacetoacetate (FAA) hydrolase family.
  
    0.632
ADR20979.1
Peroxiredoxin; COGs: COG1225 Peroxiredoxin; InterPro IPR017936: IPR000866; KEGG: chu:CHU_1893 bacterioferritin comigratory protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PRIAM: Peroxiredoxin; SPTR: Putative bacterioferritin co-migratory protein; PFAM: AhpC/TSA family.
       0.626
ADR20978.1
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: dfe:Dfer_2938 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; PFAM: Peptidase family M23.
       0.625
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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