STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20989.1KEGG: cpi:Cpin_0370 hypothetical protein; SPTR: Putative uncharacterized protein. (482 aa)    
Predicted Functional Partners:
ADR20990.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: gfo:GFO_2846 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
 
 0.964
ADR22875.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: dfe:Dfer_1098 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
 
 0.867
ADR21277.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR000531; KEGG: cat:CA2559_04165 outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
     0.770
ADR20988.1
Na-Ca exchanger/integrin-beta4; InterPro IPR003644; KEGG: cpi:Cpin_5094 conserved repeat domain protein; PFAM: Na-Ca exchanger/integrin-beta4; SPTR: Conserved repeat domain protein; PFAM: Calx-beta domain.
       0.768
ADR20733.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR018247: IPR012910: IPR000531; KEGG: sru:SRU_0358 outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
 
   0.640
ADR22640.1
Hypothetical protein; KEGG: hbu:Hbut_1584 transcriptional regulator; SPTR: Putative ParB-like nuclease domain protein; PFAM: ParB-like nuclease domain.
  
 
 0.617
ADR23721.1
parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115: IPR004437; KEGG: chu:CHU_2561 chromosome partitioning protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: Putative chromosome partitioning protein parB; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family.
  
 
 0.617
ADR21793.1
TonB-dependent receptor plug; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: bfs:BF4169 putative TonB-linked outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative uncharacterized protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
 
   
 0.606
ADR21792.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: dfe:Dfer_4455 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
  
 
   0.584
ADR20164.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: fjo:Fjoh_2431 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; SPTR: Putative outer membrane protein probably involved in nutrient binding; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
 
   0.538
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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