STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21016.1Peptidase M1 membrane alanine aminopeptidase; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: rbi:RB2501_00466 aminopeptidase M1 family protein; PFAM: Peptidase M1 membrane alanine aminopeptidase; SPTR: Aminopeptidase M1 family protein; PFAM: Peptidase family M1. (547 aa)    
Predicted Functional Partners:
ADR21014.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR011659: IPR006664; KEGG: chu:CHU_2008 outer membrane protein; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: OmpA family protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
    0.577
ADR21015.1
Tetratricopeptide TPR_3 repeat-containing protein; COGs: COG4995 conserved hypothetical protein; InterPro IPR019734: IPR013026: IPR011716: IPR001440; KEGG: chu:CHU_3775 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_3 repeat-containing protein; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat family; PFAM: Tetratricopeptide repeat.
       0.558
ADR21661.1
Protein of unknown function DUF2480; InterPro IPR018914; KEGG: chu:CHU_0100 hypothetical protein; PFAM: Protein of unknown function DUF2480; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2480).
  
     0.498
ADR23358.1
PKD domain containing protein; InterPro IPR000601; KEGG: srm:SRM_01336 hypothetical protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Putative uncharacterized protein; PFAM: PKD domain.
  
     0.447
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.