STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21047.1COGs: COG3931 N-formylglutamate amidohydrolase; InterPro IPR007709; KEGG: tbd:Tbd_1455 N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase; SPTR: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase. (233 aa)    
Predicted Functional Partners:
ADR21044.1
KEGG: dak:DaAHT2_0310 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.950
ADR21045.1
RimK domain protein ATP-grasp; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR011761: IPR013651; KEGG: fsu:Fisuc_2858 RimK domain protein ATP-grasp; PFAM: RimK domain protein ATP-grasp; SPTR: Putative uncharacterized protein; PFAM: RimK-like ATP-grasp domain.
 
     0.950
ADR21046.1
Glutamate--cysteine ligase GCS2; InterPro IPR006336; KEGG: zpr:ZPR_2567 GCS2 glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2; SPTR: GCS2 glutamate--cysteine ligase; PFAM: Glutamate-cysteine ligase family 2(GCS2).
 
     0.950
ADR21043.1
Na+/Ca+ antiporter, CaCA family; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837: IPR004481; KEGG: zpr:ZPR_3943 sodium/calcium exchanger protein; PFAM: sodium/calcium exchanger membrane region; SPTR: Putative uncharacterized protein; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein.
       0.500
ADR21048.1
Alpha/beta hydrolase fold protein; COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: gur:Gura_1597 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold.
       0.482
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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