STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21069.1ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: bth:BT_0295 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter. (296 aa)    
Predicted Functional Partners:
ADR21067.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bth:BT_0297 putative outer membrane lipoprotein SilC precursor; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Outer membrane efflux protein.
 
    0.900
ADR20694.1
ABC transporter related protein; COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR017871: IPR003439: IPR003593; KEGG: chu:CHU_2026 Mn/Zn ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Mn/Zn ABC transporter, ATP-binding protein; PFAM: ABC transporter.
 
   
0.888
ADR21068.1
KEGG: bth:BT_0296 putative xanthan lyase XalB precursor; SPTR: Putative uncharacterized protein.
  
 
 0.876
ADR21612.1
Hypothetical protein; COGs: COG0308 Aminopeptidase N; InterPro IPR018247; KEGG: smt:Smal_1028 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M1.
 
 
   0.791
ADR21066.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR018120: IPR006143; KEGG: bth:BT_0298 cation efflux system protein (outer membrane protein); SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.747
ADR21064.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR003439: IPR003593: IPR017871: IPR001036; KEGG: bth:BT_0300 AcrB/AcrD/AcrF family cation efflux protein; PFAM: acriflavin resistance protein; ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter; AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
0.616
ADR21065.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR005829: IPR001036; KEGG: bth:BT_0299 AcrB/AcrD/AcrF family cation efflux protein; PFAM: acriflavin resistance protein; SPTR: Putative uncharacterized protein; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
    0.590
ADR21421.1
InterPro IPR019860; KEGG: dfe:Dfer_4470 ABC transporter permease; gliding motility-associated protein; SPTR: ABC transporter permease; gliding motility-associated protein; TIGRFAM: gliding motility-associated ABC transporter permease protein GldF; TIGRFAM: gliding motility-associated ABC transporter permease protein GldF.
 
 
 0.556
ADR21071.1
Transcriptional regulator, GntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: pdi:BDI_1103 transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
  
  
 0.527
ADR21070.1
KEGG: ctp:CTRG_03453 hypothetical protein; SPTR: Predicted protein.
       0.516
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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