STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21070.1KEGG: ctp:CTRG_03453 hypothetical protein; SPTR: Predicted protein. (209 aa)    
Predicted Functional Partners:
ADR21071.1
Transcriptional regulator, GntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: pdi:BDI_1103 transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family.
       0.601
ADR21072.1
KEGG: cpi:Cpin_7290 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.601
ADR21073.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: cpi:Cpin_7291 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ABC transporter ATP-binding protein; PFAM: ABC transporter.
       0.601
ADR21067.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bth:BT_0297 putative outer membrane lipoprotein SilC precursor; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Outer membrane efflux protein.
       0.516
ADR21068.1
KEGG: bth:BT_0296 putative xanthan lyase XalB precursor; SPTR: Putative uncharacterized protein.
       0.516
ADR21069.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: bth:BT_0295 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
       0.516
ADR21066.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR018120: IPR006143; KEGG: bth:BT_0298 cation efflux system protein (outer membrane protein); SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.436
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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