STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21071.1Transcriptional regulator, GntR family; COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: pdi:BDI_1103 transcriptional regulator; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family. (119 aa)    
Predicted Functional Partners:
ADR21073.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: cpi:Cpin_7291 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ABC transporter ATP-binding protein; PFAM: ABC transporter.
 
  
 0.956
ADR21072.1
KEGG: cpi:Cpin_7290 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.789
ADR21070.1
KEGG: ctp:CTRG_03453 hypothetical protein; SPTR: Predicted protein.
       0.601
ADR21069.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: bth:BT_0295 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
  
  
 0.527
ADR20233.1
Protein of unknown function DUF179; COGs: COG1678 Putative transcriptional regulator protein; InterPro IPR003774; KEGG: dfe:Dfer_4074 protein of unknown function DUF179; PFAM: protein of unknown function DUF179; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1678; Belongs to the UPF0301 (AlgH) family.
   
    0.506
ADR22665.1
NUDIX hydrolase; InterPro IPR000086; KEGG: cpi:Cpin_0606 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain.
  
    0.496
ADR21068.1
KEGG: bth:BT_0296 putative xanthan lyase XalB precursor; SPTR: Putative uncharacterized protein.
  
  
 0.470
ADR21064.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR003439: IPR003593: IPR017871: IPR001036; KEGG: bth:BT_0300 AcrB/AcrD/AcrF family cation efflux protein; PFAM: acriflavin resistance protein; ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter; AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 0.457
ADR21067.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: bth:BT_0297 putative outer membrane lipoprotein SilC precursor; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Outer membrane efflux protein.
       0.413
ADR22667.1
KEGG: lbf:LBF_0345 hypothetical protein; SPTR: Putative uncharacterized protein.
   
    0.403
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.