STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21111.1KEGG: phe:Phep_3629 hypothetical protein; SPTR: Putative uncharacterized protein. (834 aa)    
Predicted Functional Partners:
ADR21112.1
KEGG: lsp:Bsph_1869 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.645
ADR21113.1
Shikimate dehydrogenase substrate binding domain protein; COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR013708; KEGG: fta:FTA_0507 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; SPTR: Shikimate/quinate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase.
       0.626
ADR21976.1
KEGG: cat:CA2559_13268 hypothetical protein; SPTR: Putative outer membrane protein, probably involved in nutrient binding.
  
     0.570
ADR23682.1
KEGG: dfe:Dfer_0219 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.543
ADR20711.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: dfe:Dfer_4830 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; SPTR: Putative uncharacterized protein; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.503
ADR21114.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR005834: IPR010023: IPR006549; KEGG: mac:MA3766 acylneuraminate cytidylyltransferase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Phosphatase kdsC; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA.
       0.459
ADR21110.1
KEGG: tgu:100227641 ring finger protein 20; SPTR: Putative uncharacterized protein.
       0.455
ADR22861.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: fjo:Fjoh_1438 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor plug; SPTR: Putative outer membrane protein probably involved in nutrient binding; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.418
ADR21160.1
Hypothetical protein; KEGG: cts:Ctha_0506 helix-hairpin-helix DNA-binding class 1; SPTR: Putative uncharacterized protein.
 
     0.415
ADR21656.1
KEGG: cat:CA2559_10578 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.410
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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