STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21116.1Integrase catalytic region; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: zpr:ZPR_4711 integrase, catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region; PFAM: Integrase core domain. (278 aa)    
Predicted Functional Partners:
ADR21117.1
Transposase IS3/IS911 family protein; InterPro IPR002514; KEGG: zpr:ZPR_4701 ISPsy11, transposase OrfA; PFAM: transposase IS3/IS911 family protein; SPTR: Transposase; PFAM: Transposase.
       0.773
ADR21118.1
KEGG: zpr:ZPR_2136 acyl-CoA reductase; SPTR: Putative uncharacterized protein; PFAM: Acyl-CoA reductase (LuxC).
       0.526
ADR20565.1
Transposase IS116/IS110/IS902 family protein; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: fjo:Fjoh_2997 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: IS1663 transposase; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
 
  
 0.494
ADR23056.1
Transposase IS116/IS110/IS902 family protein; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: fjo:Fjoh_2997 transposase IS116/IS110/IS902 family protein; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: IS1663 transposase; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
 
  
 0.494
ADR21115.1
Peroxiredoxin, OsmC subfamily; COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR003718: IPR019904; KEGG: chu:CHU_2252 osmotically inducible protein; PFAM: OsmC family protein; SPTR: Osmotically inducible protein; TIGRFAM: peroxiredoxin, OsmC subfamily; PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily.
       0.476
ADR20241.1
KEGG: cpi:Cpin_3223 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.465
ADR21119.1
COGs: COG2031 Short chain fatty acids transporter; InterPro IPR006160; KEGG: bha:BH0358 short-chain fatty acids transporter; PFAM: short chain fatty acid transporter; SPTR: Short-chain fatty acids transporter; PFAM: Short chain fatty acid transporter; TIGRFAM: conserved hypothetical integral membrane protein.
       0.413
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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