STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21174.1Patatin; InterPro IPR002641; KEGG: chu:CHU_1718 hypothetical protein; PFAM: Patatin; SPTR: Putative uncharacterized protein; PFAM: Patatin-like phospholipase. (757 aa)    
Predicted Functional Partners:
ADR20834.1
KEGG: chu:CHU_2786 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.728
ADR22869.1
CRISPR-associated protein Cas6; COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR002743: IPR010156; KEGG: chu:CHU_2218 hypothetical protein; PFAM: protein of unknown function DUF57; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas6; PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6.
  
     0.706
ADR21173.1
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792: IPR001789; KEGG: phe:Phep_2735 response regulator receiver; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Transcriptional regulator, LuxR family protein; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
       0.671
ADR22789.1
KEGG: sli:Slin_0445 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.658
ADR21193.1
GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: dfe:Dfer_0473 GH3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; SPTR: Putative plant auxin-regulated protein; PFAM: GH3 auxin-responsive promoter.
  
     0.606
ADR23180.1
KEGG: chu:CHU_0918 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.606
ADR23411.1
KEGG: chu:CHU_1568 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.599
ADR23676.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0063 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1.
  
     0.567
ADR21162.1
Surface antigen variable number repeat-containing protein; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827; KEGG: chu:CHU_2430 outer membrane protein; PFAM: surface antigen variable number repeat-containing protein; SPTR: Surface antigen variable number repeat domain protein; manually curated; PFAM: Surface antigen variable number repeat; Surface antigen.
  
    0.557
ADR20885.1
Outer membrane lipoprotein P61; InterPro IPR019734: IPR013026; KEGG: chu:CHU_2679 outer membrane lipoprotein P61; SPTR: Probable outer membrane lipoprotein P61.
  
     0.548
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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