STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21176.1KEGG: ilo:IL0085 hypothetical protein; SPTR: Uncharacterized conserved coiled coil protein. (95 aa)    
Predicted Functional Partners:
ADR21177.1
COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006089: IPR006092: IPR006091: IPR006090; KEGG: rbi:RB2501_04215 acyl-CoA dehydrogenase-like protein; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase-like protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
       0.689
ADR21178.1
Tryptophan 2,3-dioxygenase apoenzyme; COGs: COG3483 Tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: phe:Phep_0260 tryptophan 2 3-dioxygenase (vermilion); PFAM: tryptophan 23-dioxygenase; SPTR: Tryptophan 2,3-dioxygenase; PFAM: Tryptophan 2,3-dioxygenase.
       0.483
ADR21175.1
COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: pam:PANA_1805 YjeP; PFAM: MscS Mechanosensitive ion channel; SPTR: YjeP; PFAM: Mechanosensitive ion channel.
       0.453
ADR21179.1
MORN variant repeat-containing protein; COGs: COG2849 conserved hypothetical protein; InterPro IPR018337: IPR011652; KEGG: chu:CHU_1410 hypothetical protein; PFAM: MORN variant repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: MORN repeat variant.
       0.405
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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